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RNA-based next generation sequencing approaches in HLA genotyping and HLA expression quantification

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Johansson, Tiira
Helsingin yliopisto2022

Targeted RNA-Based Oxford Nanopore Sequencing for Typing 12 Classical HLA Genes

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DOI
10.3389/fgene.2021.635601
Johansson, Tiira; Koskela, Satu; Yohannes, Dawit A.; Partanen, Jukka; Saavalainen, Paivi
Frontiers in Genetics2021

Evaluating probabilistic genotyping for low-pass DNA sequencing

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DOI
10.1016/j.fsigss.2022.10.001
Mandape, Sammed N.; Kapema, Kapema Bupe; Duque, Tiffany; Smuts, Amy; King, Jonathan L.; Crysup, Benj...
Forensic science international: Genetics supplement series2022

Optimization of Genotyping-by-Sequencing (GBS) for Germplasm Fingerprinting and Trait Mapping in Faba Bean

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DOI
10.1002/leg3.254
Zhang, Hailin; Fechete, Lavinia I.; Himmelbach, Axel; Poehlein, Anja ; Lohwasser, Ulrike ; Börner, A...
Legume science2024

Platelet donor selection for HLA-immunised patients; the impact of donor-specific HLA antibody levels

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DOI
10.1111/tme.12412
Linjama, T.; Niittyvuopio, R.; Tuimala, J.; Pyörälä, M.; Rintala, H.; Rimpiläinen, J.; Kauppila, M.;...
Transfusion medicine2017

Integrating biological HLA-DPB1 mismatch models to predict survival after unrelated hematopoietic cell transplantation

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DOI
10.3324/haematol.2021.280055
Ruggeri Annalisa, De Wreede Liesbeth C, Müller Carlheinz R, Crivello Pietro, Bonneville Edouard F, P...
Haematologica2023

Genotyping of Hepatitis C virus by nucleotide sequencing: A robust method for a diagnostic laboratory

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DOI
10.1016/j.mex.2018.04.005
Virtanen, Elina; Mannonen, Laura; Lappalainen, Maija; Auvinen, Eeva
MethodsX2018

The association of the HLA-A*24:02, B*39:01 and B*39:06 alleles with type 1 diabetes is restricted to specific HLA-DR/DQ haplotypes in Finns

Referentgranskad
DOI
10.1111/tan.12967
Mikk, M. -L.; Heikkinen, T.; El-Amir, M. I.; Kiviniemi, M.; Laine, A. -P.; Harkonen, T.; Veijola, R....
HLA2017

HLA-tautiassosiaatiot

Meri, Seppo
Duodecim2012

HLA-jarjestelma

Tiilikainen, Anja
Duodecim1997

RNA-based next generation sequencing approaches in HLA genotyping and HLA expression quantification

Öppen tillgång
2022

Targeted RNA-Based Oxford Nanopore Sequencing for Typing 12 Classical HLA Genes

Referentgranskad
Öppen tillgång
DOI
10.3389/fgene.2021.635601
2021

Evaluating probabilistic genotyping for low-pass DNA sequencing

Referentgranskad
DOI
10.1016/j.fsigss.2022.10.001
2022

Optimization of Genotyping-by-Sequencing (GBS) for Germplasm Fingerprinting and Trait Mapping in Faba Bean

Referentgranskad
Öppen tillgång
DOI
10.1002/leg3.254
2024

Platelet donor selection for HLA-immunised patients; the impact of donor-specific HLA antibody levels

Referentgranskad
DOI
10.1111/tme.12412
2017

Integrating biological HLA-DPB1 mismatch models to predict survival after unrelated hematopoietic cell transplantation

Öppen tillgång
DOI
10.3324/haematol.2021.280055
2023

Genotyping of Hepatitis C virus by nucleotide sequencing: A robust method for a diagnostic laboratory

Referentgranskad
Öppen tillgång
DOI
10.1016/j.mex.2018.04.005
2018

The association of the HLA-A*24:02, B*39:01 and B*39:06 alleles with type 1 diabetes is restricted to specific HLA-DR/DQ haplotypes in Finns

Referentgranskad
DOI
10.1111/tan.12967
2017

HLA-tautiassosiaatiot

2012

HLA-jarjestelma

1997